A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25907



Internal ID15487832
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14954923..15030071hg38UCSC Ensembl
Outerchr16:14953998..15031888hg38UCSC Ensembl
Innerchr16:15048780..15123928hg19UCSC Ensembl
Outerchr16:15047855..15125745hg19UCSC Ensembl
Innerchr16:14956281..15031429hg18UCSC Ensembl
Outerchr16:14955356..15033246hg18UCSC Ensembl
Innerchr16:14956281..15031429hg17UCSC Ensembl
Outerchr16:14955356..15033246hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3877891
hg1977891
hg1877891
hg1777891
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9357
Supporting Variants
SamplesNA18517
Known GenesMIR1972-1, MIR1972-2, PDXDC1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25907
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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