A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25884



Internal ID15486240
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32539000..32546453hg38UCSC Ensembl
Outerchr15:32538500..32547397hg38UCSC Ensembl
Innerchr15:32831201..32838654hg19UCSC Ensembl
Outerchr15:32830701..32839598hg19UCSC Ensembl
Innerchr15:30618493..30625946hg18UCSC Ensembl
Outerchr15:30617993..30626890hg18UCSC Ensembl
Innerchr15:30618493..30625946hg17UCSC Ensembl
Outerchr15:30617993..30626890hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg388898
hg198898
hg188898
hg178898
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA18502
Known GenesLOC100996255
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25884
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer