A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25863



Internal ID15486162
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32403870..32433465hg38UCSC Ensembl
Outerchr15:32403495..32434642hg38UCSC Ensembl
Innerchr15:32696071..32725666hg19UCSC Ensembl
Outerchr15:32695696..32726843hg19UCSC Ensembl
Innerchr15:30483363..30512958hg18UCSC Ensembl
Outerchr15:30482988..30514135hg18UCSC Ensembl
Innerchr15:30483363..30512958hg17UCSC Ensembl
Outerchr15:30482988..30514135hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg3831148
hg1931148
hg1831148
hg1731148
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA18502
Known GenesULK4P1, ULK4P2, ULK4P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25863
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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