A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25860



Internal ID15830135
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15522066..15602002hg38UCSC Ensembl
Outerchr22:15521148..15602341hg38UCSC Ensembl
Innerchr22:16375961..16455897hg19UCSC Ensembl
Outerchr22:16375622..16456815hg19UCSC Ensembl
Innerchr22:14755961..14835897hg18UCSC Ensembl
Outerchr22:14755622..14836815hg18UCSC Ensembl
Innerchr22:14750515..14830451hg17UCSC Ensembl
Outerchr22:14750176..14831369hg17UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg3881194
hg1981194
hg1881194
hg1781194
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9866
Supporting Variants
SamplesNA11830
Known GenesOR11H1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25860
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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