A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25809



Internal ID15841365
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:15538058..15602341hg38UCSC Ensembl
Outerchr22:15533003..15603013hg38UCSC Ensembl
Innerchr22:16375622..16439905hg19UCSC Ensembl
Outerchr22:16374950..16444960hg19UCSC Ensembl
Innerchr22:14755622..14819905hg18UCSC Ensembl
Outerchr22:14754950..14824960hg18UCSC Ensembl
Innerchr22:14750176..14814459hg17UCSC Ensembl
Outerchr22:14749504..14819514hg17UCSC Ensembl
Cytoband22q11.1
Allele length
AssemblyAllele length
hg3870011
hg1970011
hg1870011
hg1770011
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9866
Supporting Variants
SamplesNA19007
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25809
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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