A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25802



Internal ID15835169
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:54637005..54666153hg38UCSC Ensembl
Outerchr19:54636490..54667631hg38UCSC Ensembl
Innerchr19:55148456..55177604hg19UCSC Ensembl
Outerchr19:55147941..55179082hg19UCSC Ensembl
Innerchr19:59840268..59869416hg18UCSC Ensembl
Outerchr19:59839753..59870894hg18UCSC Ensembl
Innerchr19:59840268..59869416hg17UCSC Ensembl
Outerchr19:59839753..59870894hg17UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg3831142
hg1931142
hg1831142
hg1731142
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9760
Supporting Variants
SamplesNA18537
Known GenesLILRB1, LILRB4, MIR8061
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25802
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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