A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25796



Internal ID15483435
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:10386640..10489285hg38UCSC Ensembl
Outerchr21:10384900..10489722hg38UCSC Ensembl
Innerchr21:11023172..11125817hg19UCSC Ensembl
Outerchr21:11022735..11127557hg19UCSC Ensembl
Innerchr21:10045043..10147688hg18UCSC Ensembl
Outerchr21:10044606..10149428hg18UCSC Ensembl
Innerchr21:10045043..10147688hg17UCSC Ensembl
Outerchr21:10044606..10149428hg17UCSC Ensembl
Cytoband21p11.1
Allele length
AssemblyAllele length
hg38104823
hg19104823
hg18104823
hg17104823
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9838
Supporting Variants
SamplesNA11830
Known GenesBAGE, BAGE2, BAGE3, BAGE4, BAGE5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25796
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer