A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25788



Internal ID15495470
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:68371147..68371873hg38UCSC Ensembl
Outerchr15:68370605..68372944hg38UCSC Ensembl
Innerchr15:68663485..68664211hg19UCSC Ensembl
Outerchr15:68662943..68665282hg19UCSC Ensembl
Innerchr15:66450539..66451265hg18UCSC Ensembl
Outerchr15:66449997..66452336hg18UCSC Ensembl
Innerchr15:66450539..66451265hg17UCSC Ensembl
Outerchr15:66449997..66452336hg17UCSC Ensembl
Cytoband15q23
Allele length
AssemblyAllele length
hg382340
hg192340
hg182340
hg172340
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9273
Supporting Variants
SamplesNA19132
Known GenesITGA11
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25788
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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