A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25688



Internal ID15838197
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:23182538..23189557hg38UCSC Ensembl
Outerchr15:23182103..23190651hg38UCSC Ensembl
Innerchr15:22683511..22690530hg19UCSC Ensembl
Outerchr15:22682417..22690965hg19UCSC Ensembl
Innerchr15:20234875..20241894hg18UCSC Ensembl
Outerchr15:20233781..20242329hg18UCSC Ensembl
Innerchr15:20234875..20241894hg17UCSC Ensembl
Outerchr15:20233781..20242329hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg388549
hg198549
hg188549
hg178549
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9181
Supporting Variants
SamplesNA18860
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25688
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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