A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25676



Internal ID15827788
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:90917300..90918518hg38UCSC Ensembl
OuterchrX:90916445..90924276hg38UCSC Ensembl
InnerchrX:90172299..90173517hg19UCSC Ensembl
OuterchrX:90171444..90179275hg19UCSC Ensembl
InnerchrX:90058955..90060173hg18UCSC Ensembl
OuterchrX:90058100..90065931hg18UCSC Ensembl
InnerchrX:89978444..89979662hg17UCSC Ensembl
OuterchrX:89977589..89985420hg17UCSC Ensembl
CytobandXq21.31
Allele length
AssemblyAllele length
hg387832
hg197832
hg187832
hg177832
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9959
Supporting Variants
SamplesNA07048
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25676
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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