A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25656



Internal ID15830092
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:63607299..63609819hg38UCSC Ensembl
Outerchr20:63606776..63610198hg38UCSC Ensembl
Innerchr20:62238652..62241172hg19UCSC Ensembl
Outerchr20:62238129..62241551hg19UCSC Ensembl
Innerchr20:61709096..61711616hg18UCSC Ensembl
Outerchr20:61708573..61711995hg18UCSC Ensembl
Innerchr20:61709096..61711616hg17UCSC Ensembl
Outerchr20:61708573..61711995hg17UCSC Ensembl
Cytoband20q13.33
Allele length
AssemblyAllele length
hg383423
hg193423
hg183423
hg173423
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9826
Supporting Variants
SamplesNA11830
Known GenesGMEB2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25656
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer