A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25615



Internal ID15833926
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:11848..31856hg38UCSC Ensembl
Outerchr16:10001..32774hg38UCSC Ensembl
Innerchr16:61848..81856hg19UCSC Ensembl
Outerchr16:60001..82774hg19UCSC Ensembl
Innerchr16:1848..21856hg18UCSC Ensembl
Outerchr16:1..22774hg18UCSC Ensembl
Innerchr16:1848..21856hg17UCSC Ensembl
Outerchr16:1..22774hg17UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg3822774
hg1922774
hg1822774
hg1722774
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9316
Supporting Variants
SamplesNA18517
Known GenesDDX11L10, LOC100288778, MIR6859-1, MIR6859-2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25615
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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