A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv2560



Internal ID15540559
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr5:178681062..178701600hg38UCSC Ensembl
Outerchr5:178108063..178128601hg19UCSC Ensembl
Outerchr5:178040669..178061207hg18UCSC Ensembl
Outerchr5:178040669..178061207hg17UCSC Ensembl
Cytoband5q35.3
Allele length
AssemblyAllele length
hg3820539
hg1920539
hg1820539
hg1720539
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5155
Supporting Variants
SamplesNA18555
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv2560
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer