A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25599



Internal ID15492981
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:5057992..5059952hg38UCSC Ensembl
Outerchr16:5056134..5060658hg38UCSC Ensembl
Innerchr16:5107993..5109953hg19UCSC Ensembl
Outerchr16:5106135..5110659hg19UCSC Ensembl
Innerchr16:5047994..5049954hg18UCSC Ensembl
Outerchr16:5046136..5050660hg18UCSC Ensembl
Innerchr16:5047994..5049954hg17UCSC Ensembl
Outerchr16:5046136..5050660hg17UCSC Ensembl
Cytoband16p13.3
Allele length
AssemblyAllele length
hg384525
hg194525
hg184525
hg174525
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9340
Supporting Variants
SamplesNA18972
Known GenesC16orf89
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25599
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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