A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25592



Internal ID15833916
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:101919204..101979033hg38UCSC Ensembl
Outerchr15:101911464..101981189hg38UCSC Ensembl
Innerchr15:102459407..102519236hg19UCSC Ensembl
Outerchr15:102451667..102521392hg19UCSC Ensembl
Innerchr15:100276930..100336759hg18UCSC Ensembl
Outerchr15:100269190..100338915hg18UCSC Ensembl
Innerchr15:100276930..100336759hg17UCSC Ensembl
Outerchr15:100269190..100338915hg17UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg3869726
hg1969726
hg1869726
hg1769726
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9315
Supporting Variants
SamplesNA18517
Known GenesDDX11L9, FAM138E, LOC100288778, MIR6859-1, MIR6859-2, OR4F4, WASH3P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25592
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer