A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25589



Internal ID15831111
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:40845002..40874766hg38UCSC Ensembl
Outerchr19:40844305..40875090hg38UCSC Ensembl
Innerchr19:41350907..41380671hg19UCSC Ensembl
Outerchr19:41350210..41380995hg19UCSC Ensembl
Innerchr19:46042747..46072511hg18UCSC Ensembl
Outerchr19:46042050..46072835hg18UCSC Ensembl
Innerchr19:46042747..46072511hg17UCSC Ensembl
Outerchr19:46042050..46072835hg17UCSC Ensembl
Cytoband19q13.2
Allele length
AssemblyAllele length
hg3830786
hg1930786
hg1830786
hg1730786
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9729
Supporting Variants
SamplesNA12740
Known GenesCYP2A6
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25589
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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