A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25587



Internal ID15830078
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr20:1605120..1608217hg38UCSC Ensembl
Outerchr20:1604738..1608598hg38UCSC Ensembl
Innerchr20:1585766..1588863hg19UCSC Ensembl
Outerchr20:1585384..1589244hg19UCSC Ensembl
Innerchr20:1533766..1536863hg18UCSC Ensembl
Outerchr20:1533384..1537244hg18UCSC Ensembl
Innerchr20:1533766..1536863hg17UCSC Ensembl
Outerchr20:1533384..1537244hg17UCSC Ensembl
Cytoband20p13
Allele length
AssemblyAllele length
hg383861
hg193861
hg183861
hg173861
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9777
Supporting Variants
SamplesNA11830
Known GenesSIRPB1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25587
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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