A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25579



Internal ID15495350
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32195306..32607306hg38UCSC Ensembl
Outerchr15:32195209..32609879hg38UCSC Ensembl
Innerchr15:32487507..32899507hg19UCSC Ensembl
Outerchr15:32487410..32902080hg19UCSC Ensembl
Innerchr15:30274799..30686799hg18UCSC Ensembl
Outerchr15:30274702..30689372hg18UCSC Ensembl
Innerchr15:30274799..30686799hg17UCSC Ensembl
Outerchr15:30274702..30689372hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg38414671
hg19414671
hg18414671
hg17414671
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA19132
Known GenesGOLGA8K, GOLGA8O, GOLGA8R, LOC100996255, ULK4P1, ULK4P2, ULK4P3, WHAMMP1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25579
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer