A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25558



Internal ID15496572
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:82798..165945hg38UCSC Ensembl
Outerchr19:79498..166238hg38UCSC Ensembl
Innerchr19:82798..165945hg19UCSC Ensembl
Outerchr19:79498..166238hg19UCSC Ensembl
Innerchr19:33798..116945hg18UCSC Ensembl
Outerchr19:30498..117238hg18UCSC Ensembl
Innerchr19:33798..116945hg17UCSC Ensembl
Outerchr19:30498..117238hg17UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg3886741
hg1986741
hg1886741
hg1786741
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9651
Supporting Variants
SamplesNA19173
Known GenesOR4F17
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25558
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer