A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25552



Internal ID15838644
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20954232..20960682hg38UCSC Ensembl
Outerchr15:20952621..20961301hg38UCSC Ensembl
Innerchr15:21159561..21166011hg19UCSC Ensembl
Outerchr15:21157950..21166630hg19UCSC Ensembl
Innerchr15:19424220..19430670hg18UCSC Ensembl
Outerchr15:19422609..19431289hg18UCSC Ensembl
Innerchr15:19424220..19430670hg17UCSC Ensembl
Outerchr15:19422609..19431289hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg388681
hg198681
hg188681
hg178681
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18860
Known GenesCT60
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25552
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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