A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25487



Internal ID15842091
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:28653819..28656380hg38UCSC Ensembl
Outerchr15:28653227..28656480hg38UCSC Ensembl
Innerchr15:28898965..28901526hg19UCSC Ensembl
Outerchr15:28898373..28901626hg19UCSC Ensembl
Innerchr15:26698006..26700567hg18UCSC Ensembl
Outerchr15:26697414..26700667hg18UCSC Ensembl
Innerchr15:26698006..26700567hg17UCSC Ensembl
Outerchr15:26697414..26700667hg17UCSC Ensembl
Cytoband15q13.1
Allele length
AssemblyAllele length
hg383254
hg193254
hg183254
hg173254
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9216
Supporting Variants
SamplesNA19132
Known GenesHERC2P9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25487
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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