A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25428



Internal ID15838339
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20587740..20590730hg38UCSC Ensembl
Outerchr15:20582742..20591132hg38UCSC Ensembl
Innerchr15:20793064..20796054hg19UCSC Ensembl
Outerchr15:20788066..20796456hg19UCSC Ensembl
Innerchr15:19053078..19056068hg18UCSC Ensembl
Outerchr15:19048080..19056470hg18UCSC Ensembl
Innerchr15:19053078..19056068hg17UCSC Ensembl
Outerchr15:19048080..19056470hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg388391
hg198391
hg188391
hg178391
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18860
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25428
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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