A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25422



Internal ID15487865
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:84516232..84533618hg38UCSC Ensembl
Outerchr15:84506920..84546776hg38UCSC Ensembl
Innerchr15:85059463..85076849hg19UCSC Ensembl
Outerchr15:85050151..85090007hg19UCSC Ensembl
Innerchr15:82860467..82877853hg18UCSC Ensembl
Outerchr15:82851155..82891011hg18UCSC Ensembl
Innerchr15:82860467..82877853hg17UCSC Ensembl
Outerchr15:82851155..82891011hg17UCSC Ensembl
Cytoband15q25.2
Allele length
AssemblyAllele length
hg3839857
hg1939857
hg1839857
hg1739857
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9290
Supporting Variants
SamplesNA18517
Known GenesDNM1P41, GOLGA6L5P, UBE2Q2P1
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25422
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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