A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25390



Internal ID15828690
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:54220731..54243897hg38UCSC Ensembl
Outerchr19:54220088..54244649hg38UCSC Ensembl
Innerchr19:54724601..54747735hg19UCSC Ensembl
Outerchr19:54723958..54748490hg19UCSC Ensembl
Innerchr19:59416413..59439547hg18UCSC Ensembl
Outerchr19:59415770..59440302hg18UCSC Ensembl
Innerchr19:59416413..59439547hg17UCSC Ensembl
Outerchr19:59415770..59440302hg17UCSC Ensembl
Cytoband19q13.42
Allele length
AssemblyAllele length
hg3824562
hg1924533
hg1824533
hg1724533
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9752
Supporting Variants
SamplesNA10839
Known GenesLILRA6, LILRB3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25390
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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