A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25381



Internal ID15493803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:43211307..43259294hg38UCSC Ensembl
Outerchr19:43210239..43260040hg38UCSC Ensembl
Innerchr19:43715459..43763446hg19UCSC Ensembl
Outerchr19:43714391..43764192hg19UCSC Ensembl
Innerchr19:48407299..48455286hg18UCSC Ensembl
Outerchr19:48406231..48456032hg18UCSC Ensembl
Innerchr19:48407299..48455286hg17UCSC Ensembl
Outerchr19:48406231..48456032hg17UCSC Ensembl
Cytoband19q13.31
Allele length
AssemblyAllele length
hg3849802
hg1949802
hg1849802
hg1749802
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9730
Supporting Variants
SamplesNA18980
Known GenesLOC284344, PSG9
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25381
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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