A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25311



Internal ID15843574
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:61199122..61252294hg38UCSC Ensembl
Outerchr11:61198387..61252762hg38UCSC Ensembl
Innerchr11:60966594..61019766hg19UCSC Ensembl
Outerchr11:60965859..61020234hg19UCSC Ensembl
Innerchr11:60723170..60776342hg18UCSC Ensembl
Outerchr11:60722435..60776810hg18UCSC Ensembl
Innerchr11:60723170..60776342hg17UCSC Ensembl
Outerchr11:60722435..60776810hg17UCSC Ensembl
Cytoband11q12.2
Allele length
AssemblyAllele length
hg3854376
hg1954376
hg1854376
hg1754376
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8833
Supporting Variants
SamplesNA19221
Known GenesPGA3, PGA4, PGA5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25311
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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