A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25293



Internal ID15483725
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:89879231..89879861hg38UCSC Ensembl
Outerchr16:89878586..89880246hg38UCSC Ensembl
Innerchr16:89945639..89946269hg19UCSC Ensembl
Outerchr16:89944994..89946654hg19UCSC Ensembl
Innerchr16:88473140..88473770hg18UCSC Ensembl
Outerchr16:88472495..88474155hg18UCSC Ensembl
Innerchr16:88473140..88473770hg17UCSC Ensembl
Outerchr16:88472495..88474155hg17UCSC Ensembl
Cytoband16q24.3
Allele length
AssemblyAllele length
hg381661
hg191661
hg181661
hg171661
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9479
Supporting Variants
SamplesNA12155
Known GenesTCF25
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25293
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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