A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25272



Internal ID15487803
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32434642..32440182hg38UCSC Ensembl
Outerchr15:32433465..32440764hg38UCSC Ensembl
Innerchr15:32726843..32732383hg19UCSC Ensembl
Outerchr15:32725666..32732965hg19UCSC Ensembl
Innerchr15:30514135..30519675hg18UCSC Ensembl
Outerchr15:30512958..30520257hg18UCSC Ensembl
Innerchr15:30514135..30519675hg17UCSC Ensembl
Outerchr15:30512958..30520257hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg387300
hg197300
hg187300
hg177300
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9238
Supporting Variants
SamplesNA18517
Known GenesULK4P1, ULK4P2, ULK4P3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25272
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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