A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25149



Internal ID15839649
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:31467311..31472993hg38UCSC Ensembl
Outerchr15:31465669..31473676hg38UCSC Ensembl
Innerchr15:31759514..31765196hg19UCSC Ensembl
Outerchr15:31757872..31765879hg19UCSC Ensembl
Innerchr15:29546806..29552488hg18UCSC Ensembl
Outerchr15:29545164..29553171hg18UCSC Ensembl
Innerchr15:29546806..29552488hg17UCSC Ensembl
Outerchr15:29545164..29553171hg17UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg388008
hg198008
hg188008
hg178008
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9234
Supporting Variants
SamplesNA18972
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25149
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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