A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25143



Internal ID15488355
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:128690..156791hg38UCSC Ensembl
Outerchr19:128338..157197hg38UCSC Ensembl
Innerchr19:128690..156791hg19UCSC Ensembl
Outerchr19:128338..157197hg19UCSC Ensembl
Innerchr19:79690..107791hg18UCSC Ensembl
Outerchr19:79338..108197hg18UCSC Ensembl
Innerchr19:79690..107791hg17UCSC Ensembl
Outerchr19:79338..108197hg17UCSC Ensembl
Cytoband19p13.3
Allele length
AssemblyAllele length
hg3828860
hg1928860
hg1828860
hg1728860
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9651
Supporting Variants
SamplesNA18537
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25143
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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