A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25138



Internal ID15830485
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:75442544..75444564hg38UCSC Ensembl
Outerchr16:75441791..75445263hg38UCSC Ensembl
Innerchr16:75476442..75478462hg19UCSC Ensembl
Outerchr16:75475689..75479161hg19UCSC Ensembl
Innerchr16:74033943..74035963hg18UCSC Ensembl
Outerchr16:74033190..74036662hg18UCSC Ensembl
Innerchr16:74033943..74035963hg17UCSC Ensembl
Outerchr16:74033190..74036662hg17UCSC Ensembl
Cytoband16q23.1
Allele length
AssemblyAllele length
hg383473
hg193473
hg183473
hg173473
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9460
Supporting Variants
SamplesNA12155
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25138
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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