A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25124



Internal ID15492962
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:30620488..30797471hg38UCSC Ensembl
Outerchr15:30617917..30798344hg38UCSC Ensembl
Innerchr15:30912691..31089674hg19UCSC Ensembl
Outerchr15:30910120..31090547hg19UCSC Ensembl
Innerchr15:28699983..28876966hg18UCSC Ensembl
Outerchr15:28697412..28877839hg18UCSC Ensembl
Innerchr15:28699983..28876966hg17UCSC Ensembl
Outerchr15:28697412..28877839hg17UCSC Ensembl
Cytoband15q13.2
Allele length
AssemblyAllele length
hg38180428
hg19180428
hg18180428
hg17180428
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9232
Supporting Variants
SamplesNA18972
Known GenesARHGAP11B, LOC100288637
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25124
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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