A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25110



Internal ID15828588
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr19:36269972..36315117hg38UCSC Ensembl
Outerchr19:36238786..36320847hg38UCSC Ensembl
Innerchr19:36760874..36806019hg19UCSC Ensembl
Outerchr19:36729688..36811749hg19UCSC Ensembl
Innerchr19:41452714..41497859hg18UCSC Ensembl
Outerchr19:41421528..41503589hg18UCSC Ensembl
Innerchr19:41452714..41497859hg17UCSC Ensembl
Outerchr19:41421528..41503589hg17UCSC Ensembl
Cytoband19q13.12
Allele length
AssemblyAllele length
hg3882062
hg1982062
hg1882062
hg1782062
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9715
Supporting Variants
SamplesNA10839
Known GenesLINC00665, LOC100134317
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25110
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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