A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25056



Internal ID15843497
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr11:5850400..5862146hg38UCSC Ensembl
Outerchr11:5850007..5871366hg38UCSC Ensembl
Innerchr11:5871630..5883376hg19UCSC Ensembl
Outerchr11:5871237..5892596hg19UCSC Ensembl
Innerchr11:5828206..5839952hg18UCSC Ensembl
Outerchr11:5827813..5849172hg18UCSC Ensembl
Innerchr11:5828206..5839952hg17UCSC Ensembl
Outerchr11:5827813..5849172hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3821360
hg1921360
hg1821360
hg1721360
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8786
Supporting Variants
SamplesNA19221
Known GenesOR52E8
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25056
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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