A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv25037



Internal ID15829961
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr17:64857896..64861686hg38UCSC Ensembl
Outerchr17:64856761..64862291hg38UCSC Ensembl
Innerchr17:62854014..62857804hg19UCSC Ensembl
Outerchr17:62852879..62858409hg19UCSC Ensembl
Innerchr17:60284476..60288266hg18UCSC Ensembl
Outerchr17:60283341..60288871hg18UCSC Ensembl
Innerchr17:60284476..60288266hg17UCSC Ensembl
Outerchr17:60283341..60288871hg17UCSC Ensembl
Cytoband17q24.1
Allele length
AssemblyAllele length
hg385531
hg195531
hg185531
hg175531
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9585
Supporting Variants
SamplesNA11830
Known GenesLRRC37A3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv25037
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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