A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24984



Internal ID15481311
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr21:10393746..10415248hg38UCSC Ensembl
Outerchr21:10392809..10416395hg38UCSC Ensembl
Innerchr21:11097209..11118711hg19UCSC Ensembl
Outerchr21:11096062..11119648hg19UCSC Ensembl
Innerchr21:10119080..10140582hg18UCSC Ensembl
Outerchr21:10117933..10141519hg18UCSC Ensembl
Innerchr21:10119080..10140582hg17UCSC Ensembl
Outerchr21:10117933..10141519hg17UCSC Ensembl
Cytoband21p11.1
Allele length
AssemblyAllele length
hg3823587
hg1923587
hg1823587
hg1723587
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9838
Supporting Variants
SamplesNA07048
Known GenesBAGE, BAGE2, BAGE3, BAGE4, BAGE5
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24984
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer