A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24953



Internal ID15841696
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20626192..21013311hg38UCSC Ensembl
Outerchr15:20625069..21014390hg38UCSC Ensembl
Innerchr15:20831495..21218640hg19UCSC Ensembl
Outerchr15:20830372..21219719hg19UCSC Ensembl
Innerchr15:19091509..19483299hg18UCSC Ensembl
Outerchr15:19090386..19484378hg18UCSC Ensembl
Innerchr15:19091509..19483299hg17UCSC Ensembl
Outerchr15:19090386..19484378hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38389322
hg19389348
hg18393993
hg17393993
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA19132
Known GenesCT60, CXADRP2, LOC646214, NBEAP1, NF1P2, POTEB, POTEB2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24953
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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