A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24916



Internal ID15833473
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:101955339..101973519hg38UCSC Ensembl
Outerchr15:101954981..101973824hg38UCSC Ensembl
Innerchr15:102495542..102513722hg19UCSC Ensembl
Outerchr15:102495184..102514027hg19UCSC Ensembl
Innerchr15:100313065..100331245hg18UCSC Ensembl
Outerchr15:100312707..100331550hg18UCSC Ensembl
Innerchr15:100313065..100331245hg17UCSC Ensembl
Outerchr15:100312707..100331550hg17UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg3818844
hg1918844
hg1818844
hg1718844
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9315
Supporting Variants
SamplesNA18504
Known GenesFAM138E, LOC100288778, MIR6859-1, MIR6859-2, WASH3P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24916
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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