A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24844



Internal ID15839637
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20003612..22308242hg38UCSC Ensembl
Outerchr15:20002599..22308242hg38UCSC Ensembl
Innerchr15:20208865..22646418hg19UCSC Ensembl
Outerchr15:20207852..22647043hg19UCSC Ensembl
Innerchr15:18468879..20197782hg18UCSC Ensembl
Outerchr15:18467866..20198407hg18UCSC Ensembl
Innerchr15:18468879..20197782hg17UCSC Ensembl
Outerchr15:18467866..20198407hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382305644
hg192439192
hg181730542
hg171730542
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18972
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24844
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer