A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24648



Internal ID15498158
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:43618942..43659846hg38UCSC Ensembl
Outerchr15:43618769..43660722hg38UCSC Ensembl
Innerchr15:43911140..43952044hg19UCSC Ensembl
Outerchr15:43910967..43952920hg19UCSC Ensembl
Innerchr15:41698432..41739336hg18UCSC Ensembl
Outerchr15:41698259..41740212hg18UCSC Ensembl
Innerchr15:41698432..41739336hg17UCSC Ensembl
Outerchr15:41698259..41740212hg17UCSC Ensembl
Cytoband15q15.3
Allele length
AssemblyAllele length
hg3841954
hg1941954
hg1841954
hg1741954
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9251
Supporting Variants
SamplesNA19240
Known GenesCATSPER2, STRC
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24648
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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