A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24559



Internal ID15495594
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:70111551..70197883hg38UCSC Ensembl
Outerchr16:70110189..70198469hg38UCSC Ensembl
Innerchr16:70145454..70231786hg19UCSC Ensembl
Outerchr16:70144092..70232372hg19UCSC Ensembl
Innerchr16:68702955..68789287hg18UCSC Ensembl
Outerchr16:68701593..68789873hg18UCSC Ensembl
Innerchr16:68702955..68789287hg17UCSC Ensembl
Outerchr16:68701593..68789873hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg3888281
hg1988281
hg1888281
hg1788281
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9455
Supporting Variants
SamplesNA19144
Known GenesCLEC18C, PDPR
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24559
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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