A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24516



Internal ID15484059
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:33315920..33369282hg38UCSC Ensembl
Outerchr16:33315790..33369452hg38UCSC Ensembl
Innerchr16:33217161..33270523hg19UCSC Ensembl
Outerchr16:33217031..33270693hg19UCSC Ensembl
Innerchr16:33124662..33178024hg18UCSC Ensembl
Outerchr16:33124532..33178194hg18UCSC Ensembl
Innerchr16:33124662..33178024hg17UCSC Ensembl
Outerchr16:33124532..33178194hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3853663
hg1953663
hg1853663
hg1753663
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA12155
Known GenesTP53TG3, TP53TG3B, TP53TG3C
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24516
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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