A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24177



Internal ID15486512
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:25686668..25687197hg38UCSC Ensembl
Outerchr15:25685984..25687666hg38UCSC Ensembl
Innerchr15:25931815..25932344hg19UCSC Ensembl
Outerchr15:25931131..25932813hg19UCSC Ensembl
Innerchr15:23482908..23483437hg18UCSC Ensembl
Outerchr15:23482224..23483906hg18UCSC Ensembl
Innerchr15:23482908..23483437hg17UCSC Ensembl
Outerchr15:23482224..23483906hg17UCSC Ensembl
Cytoband15q12
Allele length
AssemblyAllele length
hg381683
hg191683
hg181683
hg171683
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9201
Supporting Variants
SamplesNA18504
Known GenesATP10A
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24177
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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