A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv24017



Internal ID15833823
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:20579502..21103786hg38UCSC Ensembl
Outerchr15:20579152..21104690hg38UCSC Ensembl
Innerchr15:20784826..21309115hg19UCSC Ensembl
Outerchr15:20784475..21310019hg19UCSC Ensembl
Innerchr15:19044840..19573774hg18UCSC Ensembl
Outerchr15:19044489..19574678hg18UCSC Ensembl
Innerchr15:19044840..19573774hg17UCSC Ensembl
Outerchr15:19044489..19574678hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg38525539
hg19525545
hg18530190
hg17530190
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9179
Supporting Variants
SamplesNA18504
Known GenesCT60, CXADRP2, LOC646214, NBEAP1, NF1P2, POTEB, POTEB2
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv24017
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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