A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23950



Internal ID15844275
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:48053067..48059544hg38UCSC Ensembl
Outerchr10:48052878..48059692hg38UCSC Ensembl
Innerchr10:49261089..49267588hg19UCSC Ensembl
Outerchr10:49260900..49267736hg19UCSC Ensembl
Innerchr10:48931095..48937594hg18UCSC Ensembl
Outerchr10:48930906..48937742hg18UCSC Ensembl
Innerchr10:48931095..48937594hg17UCSC Ensembl
Outerchr10:48930906..48937742hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg386815
hg196837
hg186837
hg176837
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19221
Known Genes
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23950
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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