A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23896



Internal ID15844144
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr10:48010002..48029015hg38UCSC Ensembl
Outerchr10:48008423..48029784hg38UCSC Ensembl
Innerchr10:49218027..49237034hg19UCSC Ensembl
Outerchr10:49216447..49237803hg19UCSC Ensembl
Innerchr10:48888033..48907040hg18UCSC Ensembl
Outerchr10:48886453..48907809hg18UCSC Ensembl
Innerchr10:48888033..48907040hg17UCSC Ensembl
Outerchr10:48886453..48907809hg17UCSC Ensembl
Cytoband10q11.22
Allele length
AssemblyAllele length
hg3821362
hg1921357
hg1821357
hg1721357
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv8636
Supporting Variants
SamplesNA19221
Known GenesCTGLF12P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23896
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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