A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23821



Internal ID15483123
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:14694958..14701955hg38UCSC Ensembl
Outerchr16:14694480..14702879hg38UCSC Ensembl
Innerchr16:14788815..14795812hg19UCSC Ensembl
Outerchr16:14788337..14796736hg19UCSC Ensembl
Innerchr16:14696316..14703313hg18UCSC Ensembl
Outerchr16:14695838..14704237hg18UCSC Ensembl
Innerchr16:14696316..14703313hg17UCSC Ensembl
Outerchr16:14695838..14704237hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg388400
hg198400
hg188400
hg178400
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9353
Supporting Variants
SamplesNA11830
Known GenesPLA2G10
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23821
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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