A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23813



Internal ID15842832
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:101906484..101977284hg38UCSC Ensembl
Outerchr15:101906131..101978230hg38UCSC Ensembl
Innerchr15:102446687..102517487hg19UCSC Ensembl
Outerchr15:102446334..102518433hg19UCSC Ensembl
Innerchr15:100264210..100335010hg18UCSC Ensembl
Outerchr15:100263857..100335956hg18UCSC Ensembl
Innerchr15:100264210..100335010hg17UCSC Ensembl
Outerchr15:100263857..100335956hg17UCSC Ensembl
Cytoband15q26.3
Allele length
AssemblyAllele length
hg3872100
hg1972100
hg1872100
hg1772100
Variant TypeCNV gain
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9315
Supporting Variants
SamplesNA19144
Known GenesDDX11L9, FAM138E, LOC100288778, MIR6859-1, MIR6859-2, OR4F4, WASH3P
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23813
Frequency
Sample Size31
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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