A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23572



Internal ID15484681
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32232902..32317273hg38UCSC Ensembl
Outerchr16:32231235..32317693hg38UCSC Ensembl
Innerchr16:32244223..32328594hg19UCSC Ensembl
Outerchr16:32242556..32329014hg19UCSC Ensembl
Innerchr16:32151724..32236095hg18UCSC Ensembl
Outerchr16:32150057..32236515hg18UCSC Ensembl
Innerchr16:32151724..32236095hg17UCSC Ensembl
Outerchr16:32150057..32236515hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg3886459
hg1986459
hg1886459
hg1786459
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA12740
Known GenesLOC390705, TP53TG3D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23572
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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