A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv23437



Internal ID15488476
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:32232902..32445205hg38UCSC Ensembl
Outerchr16:32231235..32451577hg38UCSC Ensembl
Innerchr16:32244223..32456526hg19UCSC Ensembl
Outerchr16:32242556..32462898hg19UCSC Ensembl
Innerchr16:32151724..32364027hg18UCSC Ensembl
Outerchr16:32150057..32370399hg18UCSC Ensembl
Innerchr16:32151724..32364027hg17UCSC Ensembl
Outerchr16:32150057..32370399hg17UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38220343
hg19220343
hg18220343
hg17220343
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv9439
Supporting Variants
SamplesNA18537
Known GenesLOC390705, TP53TG3D
MethodOligo aCGH
AnalysisStatistical threshold = 5.0, minimum +/- log2 ratio = 0.25 and minimum number of probes = 2
PlatformAgilent-015686 Custom Human 244K CGH Microarray
Comments
ReferencePerry_et_al_2008
Pubmed ID18304495
Accession Number(s)nssv23437
Frequency
Sample Size31
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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